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Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategies

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dc.contributor.authorRollin, Johan
dc.contributor.authorBester, Rachelle
dc.contributor.authorBrostaux, Yves
dc.contributor.authorCaglayan, Kadriye
dc.contributor.authorDe Jonghe, Kris
dc.contributor.authorEichmeier, Ales
dc.contributor.authorFoucart, Yoika
dc.contributor.authorHaegeman, Annelies
dc.contributor.authorKoloniuk, Igor
dc.contributor.authorKominek, Petr
dc.contributor.authorMaree, Hans
dc.contributor.authorOnder, Serkan
dc.contributor.authorPosada Céspedes, Susana
dc.contributor.authorRoumi, Vahid
dc.contributor.authorŠafářová, Dana
dc.contributor.authorSchumpp, Olivier
dc.contributor.authorUlubas Serce, Cigdem
dc.contributor.authorSõmera, Merike
dc.contributor.authorTamisier, Lucie
dc.contributor.authorVainio, Eeva
dc.contributor.authorvan der Vlugt, Rene AA
dc.contributor.authorMassart, Sebastien
dc.contributor.departmentid4100110710
dc.contributor.organizationLuonnonvarakeskus
dc.date.accessioned2023-12-11T08:17:38Z
dc.date.accessioned2025-05-28T07:40:13Z
dc.date.available2023-12-11T08:17:38Z
dc.date.issued2023
dc.description.vuosik2023
dc.format.bitstreamfalse
dc.format.pagerange25 p.
dc.identifier.olddbid496719
dc.identifier.oldhandle10024/554153
dc.identifier.urihttps://jukuri.luke.fi/handle/11111/13038
dc.language.isoen
dc.okm.avoinsaatavuuskytkin1 = Avoimesti saatavilla
dc.okm.corporatecopublicationei
dc.okm.discipline1183
dc.okm.internationalcopublicationon
dc.okm.julkaisukanavaoa1 = Open access -julkaisukanavassa ilmestynyt julkaisu
dc.okm.openaccess1 = Open access -julkaisukanavassa ilmestynyt julkaisu
dc.okm.selfarchivedei
dc.publisherPeerJ
dc.relation.articlenumbere15816
dc.relation.doi10.7717/peerj.15816
dc.relation.ispartofseriesPeerJ
dc.relation.issn2167-8359
dc.relation.volume11
dc.source.identifierhttps://jukuri.luke.fi/handle/10024/554153
dc.subjectBioinformatic
dc.subjectGenomic
dc.subjectVirus
dc.subjectPlant
dc.subjectVariant
dc.tehOHFO-Puskuri-4
dc.titleDetection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategies
dc.typepublication
dc.type.okmfi=A1 Alkuperäisartikkeli tieteellisessä aikakauslehdessä|sv=A1 Originalartikel i en vetenskaplig tidskrift|en=A1 Journal article (refereed), original research|

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